PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027093057.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 380aa MW: 43406.4 Da PI: 6.4694 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29 | 1.8e-09 | 308 | 342 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_027093057.1 308 KWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 342 669*****************************885 PP | |||||||
2 | ELK | 37.8 | 4e-13 | 262 | 283 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s XP_027093057.1 262 ELKNHLLRKYSGYLSSLKQELS 283 9*******************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 380 aa Download sequence |
MEEYNHHLGE NTGPRGSFLY GGPVLAAPSS SVYARASSGS NNQLPISSFH LQSSAECYQQ 60 SEGQDHPIVK TEAGASSHHQ HGQHKFQYPS IIRSHQTVQD HHQQPHHQES EISGEAEAIK 120 AKIIAHPQYS NLLEAYMDCQ KVGAPPEVVA RLTAARQEFE ARQRASLVTG RDVNKDPELD 180 QFMEAYYDML VKYREELTRP LQEAMEFMRR VETQLNMLGN GPVRIFNSDE KCEGVGSSEE 240 DQDNSGGETE LPEIDPRAED RELKNHLLRK YSGYLSSLKQ ELSKKKKKGK LPKDARQKLL 300 SWWELHYKWP YPSETEKVAL AESTGLDQKQ INNWFINQRK RHWKPSEDMQ FMVMDGLHAQ 360 NTALYMEGHY MGEGPYRLGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G08150.1 | 1e-127 | TALE family protein |