PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027092650.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 318aa MW: 36738.4 Da PI: 5.8457 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 173.4 | 6.6e-54 | 7 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eelv +yL++kv++ k++l +vi ++d+y++ePwd++ ++e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+v XP_027092650.1 7 VPPGFRFHPTEEELVGYYLNRKVNSLKIDL-DVIVDIDLYRMEPWDIQDrckLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAV 100 69****************************.99**************952432234677************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s k++ +g++ktLvfykgrap+g+ktdW+mheyrl XP_027092650.1 101 IS-KEKIIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 135 **.9999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
MEMESCVPPG FRFHPTEEEL VGYYLNRKVN SLKIDLDVIV DIDLYRMEPW DIQDRCKLGY 60 EEQNEWYFFS HKDRKYPTGT RTNRATAAGF WKATGRDKAV ISKEKIIGMR KTLVFYKGRA 120 PNGRKTDWIM HEYRLQTSEQ GPSQEEGWVV CRAFKKPCPS HKQGLEAWSN AYYIRENGKY 180 QPPSFPDKSI NSMHAVNPIS IHGVDFQQVP LLADHHELIS NHAARFDNQL IEIPQLDSPS 240 ISTSLATKDQ VFESGSLVNE DGEDVRSNIY CQQYNDWKVF DKLLVQQVID PSASYACQNQ 300 PVLIPRDDEL LLGCFTDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 8e-99 | NAC family protein |