PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027092150.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 355aa MW: 38828.6 Da PI: 7.4346

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027092150.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	42.9	1.5e-13	16	113	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104 d+e++ +L + +gk+l+ +vi++++ ++++P++Lp + wy +++kk+ n+ g+W+++g+ ++ + +++ g ++ XP_027092150.1 16 ADDEVI-MHLDRIRQGKPLPN-NVIDDTNPFQFNPSNLP-----TGGIWYLVGSTEKKE------NK---FGFWREKGTALDIRT-GSAISGRRT 93 699999.89*******999.99***********.....345677766655543......44...6*********9.999** PP NAM 105 tLvfykgrapkgektdWvmheyrl 128 tL f a + +kt+W+mhey++ XP_027092150.1 94 TLEFI---A-REQKTNWIMHEYKI 113 *...3.3468******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MCPPAPDSPA DMVHGADDEV IMHLDRIRQG KPLPNNVIDD TNPFQFNPSN LPTGGIWYLV 60 GSTEKKENKF GFWREKGTAL DIRTGSAISG RRTTLEFIAR EQKTNWIMHE YKITETGKGK 120 ESRVMCRVLQ SGGRSSNIDL RPNSRQAVSF EQGSRSPSLK HSGVDGNKLL SEADRLLEPR 180 TREPPYMIDG DYLELDDLAD PQSSSTSADN SSCSSFTLDE YFDSHALLQE LEDKNNQGLR 240 ETGTSSKFSV TASVPPSEVV MLPATLGSLV CASGRQPSVG CTAPSSVLKT QNVGERIPDH 300 TAKKPRTEKK EEDSAGSLCP APPLGNAGKS TSKGKEKAAS VNTKRLKKYM CFMPF

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MCPPAPDSPA DMVHGADDEV IMHLDRIRQG KPLPNNVIDD TNPFQFNPSN LPTGGIWYLV  60
GSTEKKENKF GFWREKGTAL DIRTGSAISG RRTTLEFIAR EQKTNWIMHE YKITETGKGK  120
ESRVMCRVLQ SGGRSSNIDL RPNSRQAVSF EQGSRSPSLK HSGVDGNKLL SEADRLLEPR  180
TREPPYMIDG DYLELDDLAD PQSSSTSADN SSCSSFTLDE YFDSHALLQE LEDKNNQGLR  240
ETGTSSKFSV TASVPPSEVV MLPATLGSLV CASGRQPSVG CTAPSSVLKT QNVGERIPDH  300
TAKKPRTEKK EEDSAGSLCP APPLGNAGKS TSKGKEKAAS VNTKRLKKYM CFMPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	2e-13	NAC family protein