PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027092016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 357aa MW: 38307.6 Da PI: 9.9335 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63.6 | 3.9e-20 | 14 | 59 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEdell ++v+++G+++W++I++ ++ gR++k+c++rw + XP_027092016.1 14 KGPWSPEEDELLQRLVEKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 59 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 55.1 | 1.7e-17 | 68 | 110 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T++Ede++++a++++G++ W+tIar + gRt++ +k++w++ XP_027092016.1 68 AFTADEDEKIIRAHAKFGNK-WATIARLLS-GRTDNAIKNHWNST 110 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence |
MGTIAHRKES DRIKGPWSPE EDELLQRLVE KHGPRNWSLI SKSIPGRSGK SCRLRWCNQL 60 SPQVEHRAFT ADEDEKIIRA HAKFGNKWAT IARLLSGRTD NAIKNHWNST LKRRCSSMSD 120 DFNFEVPQQP LKRSASVGPG TNVSAIYVNP SSPSGSDLSD SSLSGFGSGH VFRPLALTGG 180 ISPPVQQIET LSAAAPDPPT SLTLSLPGSS SAKSPTQNSK SVDDPTPSLG AAGQTLQQPT 240 QVMVRPPPPP PPPPPPPPLA PAPLTPMAPP QAAPVAPPQS QGGFVYPVPA PAPAPAPMPG 300 QVAERQFFSQ EFLGVLQEMI RKEVRSYMSG IEQNGMCMQT EAIRNAVVKR IGISKID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 2e-72 | MYB family protein |