PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027091646.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 358aa MW: 39761.8 Da PI: 5.8992

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027091646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.3	1.6e-08	178	219	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 +k+ +r +NR AA rsR+RKk++i+ Le k+ eae ++L XP_027091646.1 178 SKKRKRQLRNRDAAVRSRERKKMYIKDLEIKSRYYEAECRRL 219 6999***************************99988887766 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MMSDFGGGGE DDILVLVGDD DLDHSNTMLD ATPPHHHHHP NPSSPAAAAQ YDHDFSNIRQ 60 IEQFLLNEDD IIDMYPQEEG EEDRLTASLG FLSDIILDSP LPSDPSSPDN PSPESDFPYS 120 NHNSNSDSDA KDVQQPPKLI GHQELLPPAA IPHPHQEEKE GSEAGQLNNN GDDADPISKK 180 RKRQLRNRDA AVRSRERKKM YIKDLEIKSR YYEAECRRLG MLLQCYLAEN HALRLSLNTT 240 TTTQAFDAST TKQESAVLIL ESLLLGSLLW FLGIVALLTL PRQLSNLGAK KVGCKIPGSL 300 APREAGIKIH GTLEFQSFMM SKRCRGSRRK MRCSFKLGLA ASFRGILSVT PCQFLAFC

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MMSDFGGGGE DDILVLVGDD DLDHSNTMLD ATPPHHHHHP NPSSPAAAAQ YDHDFSNIRQ  60
IEQFLLNEDD IIDMYPQEEG EEDRLTASLG FLSDIILDSP LPSDPSSPDN PSPESDFPYS  120
NHNSNSDSDA KDVQQPPKLI GHQELLPPAA IPHPHQEEKE GSEAGQLNNN GDDADPISKK  180
RKRQLRNRDA AVRSRERKKM YIKDLEIKSR YYEAECRRLG MLLQCYLAEN HALRLSLNTT  240
TTTQAFDAST TKQESAVLIL ESLLLGSLLW FLGIVALLTL PRQLSNLGAK KVGCKIPGSL  300
APREAGIKIH GTLEFQSFMM SKRCRGSRRK MRCSFKLGLA ASFRGILSVT PCQFLAFC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	203	KKRKRQLRNRDAAVRSRERKKMYIK
2	180	204	KKRKRQLRNRDAAVRSRERKKMYIK
3	180	199	KRKRQLRNRDAAVRSRERKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G42990.1	9e-14	bZIP family protein