PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027091567.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 481aa MW: 54391.8 Da PI: 4.2484 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 164.8 | 3.1e-51 | 19 | 145 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdeelv +yLkkk+ ++++ l +vi e+d+yk++P++Lp +k+k+++++w+fFs+rd+ky++g r+nrat+ gyWkatgkd+ + + XP_027091567.1 19 PPGFRFHPTDEELVLYYLKKKMCRRRHLL-DVIGETDVYKWDPEELPglSKLKTGDRQWFFFSPRDRKYPNGARSNRATRYGYWKATGKDRIIAC 112 9**********************999766.9****************6559999****************************************9 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++vg+kktLv+ykgrap+ge+tdWvmhey+l XP_027091567.1 113 -NARDVGVKKTLVYYKGRAPSGERTDWVMHEYTL 145 .999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 481 aa Download sequence |
MKVIEEEISS CFGSGKIFPP GFRFHPTDEE LVLYYLKKKM CRRRHLLDVI GETDVYKWDP 60 EELPGLSKLK TGDRQWFFFS PRDRKYPNGA RSNRATRYGY WKATGKDRII ACNARDVGVK 120 KTLVYYKGRA PSGERTDWVM HEYTLDEEEL KRSQAVKDYY ALYKVYKKSG PGPKNGEQYG 180 APFKEEEWDD EGGETNGLID HNDQENPVKL VNETAPVSEN GIVSQPQSHL DDFEEFVNGM 240 ANEPVVVPSP AVDYEYSLEE LLCEEEAQSN LVDQSSWEVN LHDQSTAVHP ACQEYNVQPS 300 FDLTQSGTSQ LQLHEASEVT SAPQSYASAP HAVEGDFLED FLEMDDLLGP QPTVQAFGKS 360 AVENLQFDEF DGLSELDLYK DAPLFLNEFE TGEQGQIAQP YMNNMGTEVV DPVSSFYFND 420 GGTETINCEQ TYLSNPEEVS FQPWSHDQRS SVFAATDAHQ GTIQPAISDG WYGKTMSSST 480 W |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34190.1 | 1e-107 | NAC family protein |