PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027090875.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 26756.9 Da PI: 5.0724 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.5e-18 | 40 | 90 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g XP_027090875.1 40 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 90 59*****998.**********9...336************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MVKTEHKIQS EPAKPTKPIP SSSSSSSSSS SSKSKSSCKK KYKGVRMRSW GSWVSEIRAP 60 NQKTRIWLGS YSTAEAAARA YDAALLCLKG SSANLNFPIS SYSLRFPESL IMSPKSIQRV 120 AAAAAATVST TTTATATDPE SPDSPSQPST SSYSASESAS SPTPSLSSSP PDHPPYIIEE 180 EDISASVSLP PANLLDEAVM PMTMNAAAGQ WYTFDSPKYT DMVNGVFFDP MMMIEDVYEE 240 GDINLWSFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-30 | ERF family protein |