PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027090577.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 387aa MW: 43665.5 Da PI: 6.9883

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027090577.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.8	8.6e-53	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yL+kk++ +k+++ ev++evd++k+ePw+L++++k ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_027090577.1 8 VPPGFRFHPTDEELLHYYLRKKLSFQKFDM-EVVREVDLNKIEPWELQERCKIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCI 101 69**************************.99**********964444222455********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle XP_027090577.1 102 RN-SFQKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 137 9.8899***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MASSNGGVPP GFRFHPTDEE LLHYYLRKKL SFQKFDMEVV REVDLNKIEP WELQERCKIG 60 STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNSFQKIGM RKTLVFYRGR 120 APHGQKTDWI MHEYRLEDGD DPEANPNEDG WVVCRVFKKK NLFKVGNEGG GTGGGSGAAA 180 SDHLNATAST NINQPRGFMQ RENQYLFHQQ HHPHVLAGYS HMIPLPSMPH QQQYSAQQIQ 240 AQNFIPTHKP QLDAMGYDLS AFSSAASESI VVPMMQVKQL MANARDCDSG ESDQNNSSLR 300 TYQQACESGL EVGTNSCEPS QHQSMITTGD DQNLNEWGMI DPQLGHAHDS SKGARFEVGE 360 PNNPSNSMNH VSQLSLRGEM DFWGYGK

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MASSNGGVPP GFRFHPTDEE LLHYYLRKKL SFQKFDMEVV REVDLNKIEP WELQERCKIG  60
STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNSFQKIGM RKTLVFYRGR  120
APHGQKTDWI MHEYRLEDGD DPEANPNEDG WVVCRVFKKK NLFKVGNEGG GTGGGSGAAA  180
SDHLNATAST NINQPRGFMQ RENQYLFHQQ HHPHVLAGYS HMIPLPSMPH QQQYSAQQIQ  240
AQNFIPTHKP QLDAMGYDLS AFSSAASESI VVPMMQVKQL MANARDCDSG ESDQNNSSLR  300
TYQQACESGL EVGTNSCEPS QHQSMITTGD DQNLNEWGMI DPQLGHAHDS SKGARFEVGE  360
PNNPSNSMNH VSQLSLRGEM DFWGYGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-135	NAC family protein