PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027090528.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 175aa    MW: 20014.7 Da    PI: 9.8269
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027090528.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.91.9e-107512774128
             NAM  74 knratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      n  t +gyW  t + k++++ +g++ g kk +++++g+++ g++t+W++ ++rl
  XP_027090528.1  75 DNVFTGDGYWTPTSE-KAIYT-GGQADGYKKEFIYHRGTEHPGKRTNWCIYQFRL 127
                     455799******976.99999.99*****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MNRTGDLAEI EKPSAASARG NDYSGGKRAR IEVPVGCKFD PADEELMFYL RNKILDSCEY  60
STGEKWFFNT VAPNDNVFTG DGYWTPTSEK AIYTGGQADG YKKEFIYHRG TEHPGKRTNW  120
CIYQFRLNPD VYVANAIGNT VEYKISSIVA CMVFRKEAVV QSNRRKRKKK RKKKN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164170RRKRKKK
2164172RRKRKKKRK
3165169RKRKK
4165171RRKRKKK
5165173RRKRKKKRK
6166172RRKRKKK
7166174RRKRKKKRK
8167174RKKKRKKK
9167173RRKRKKK
10168174RRKRKKK
11169173RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.18e-13NAC family protein