PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027090439.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | G2-like | ||||||||
Protein Properties | Length: 458aa MW: 51095.7 Da PI: 9.1212 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 104.3 | 7.5e-33 | 66 | 119 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ XP_027090439.1 66 PRLRWTPDLHRCFVQAVEKLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 119 8****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 67 | 118 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ XP_027090439.1 67 RLRWTPDLHRCFVQAVEKLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMYR 118 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence |
MEEKGNFSDG LPEVNSSDHG MKDGGGSDDH KTSGSSSSNS MAVESTGKKL SLSATGVRQY 60 VRSKMPRLRW TPDLHRCFVQ AVEKLGGQER ATPKLVLQLM NVKGLSIAHV KSHLQMYRSK 120 NIDDHGQVIN ERGYPFRSMD HFLRNGWQFA TLDRGIRSSF SYSDDNWTSN MTWRAMPGTV 180 DDTNIKRGTV FHNTSLGRIY GGIGANAING SLFGTQERRK SYNYMEDFTW LPDTKINHKG 240 IWPSRGETNS ELTQIYKEKR VESIVNAASP ETKCSGTKTE KANTAKRKAP DNGVDLNLSL 300 SMNLRQGESK RTHNWDEEEK DSTLSLSLFS ASNEEKCSID LNMSSTFNSE ILLVLAQEDS 360 PMIACFVRTR IIKVDKWGGC LLSLQHWAQQ NSASSPLSAG PRIMTVVACM IRTVAQSRFV 420 DAVLQSLLQN GFLHLQHFLP LYAALQLGSQ GFNIILQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 4e-37 | G2-like family protein |