PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027090270.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 233aa MW: 26213.9 Da PI: 8.6838

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027090270.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	51.8	2.7e-16	6	144	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy..kvePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratksg 81 p GfrF+P++eel+ L kv+++ e+ +++ke +y +ePwd k +++++ +y F+k +k +a k++ r++ g XP_027090270.1 6 PIGFRFRPSEEELI-SLLWLKVTNQLDET-DHVKEKILYgeGAEPWDVLGdddvrwqfcddsgKGASTKRMVYVFTKLRKLSA--KKTARTAGLG 96 89**********.88999999988777.6777776662257*963468889988876543345557799999988765..699999* PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +W k+ +v +ge++g +++L + ++ + +k W++hey l XP_027090270.1 97 TWDGETKSYPVEGMiTGEKIGSRRMLSYVLNSGSIRVKGGWIIHEYWL 144 999999998878999********99999999*******87 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MADNIPIGFR FRPSEEELIS LLWLKVTNQL DETDHVKEKI LYGEGAEPWD VLGDDDVRWQ 60 FCDDSGKGAS TKRMVYVFTK LRKLSAKKTA RTAGLGTWDG ETKSYPVEGM ITGEKIGSRR 120 MLSYVLNSGS IRVKGGWIIH EYWLDGALLN GLNSSHNTDY VLCRIIKDDS KYTKVKESAK 180 KGKVAKEKEV GNRGCREVVL GKRKMNLEQE SSQASKKSCS NPMDELPNLV NCD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62380.1	2e-11	NAC family protein