PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027089735.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bZIP
Protein Properties Length: 265aa    MW: 29034.4 Da    PI: 9.5737
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027089735.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.67.2e-15193237448
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                       r +r++kNRe+A rsR+RK+a++ eLe kv+ L +eN +L+ +
  XP_027089735.1 193 CHRNKRMIKNRESAARSRARKQAYTSELEIKVARLMEENAKLRRQ 237
                     5799**************************************954 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MDNRGSSTTS TKTKDNINTT VQISAPTSKS SSSIPTSSPI PIAPAPAPPS SCNSKYSMEE  60
VWKDICPSAL LHHPTSTSSS AAALEGIVFQ EFLSRPSRAQ YDSTSRHHHH HPGRQSSLES  120
IDRGSFGSHS QGQPAPAATA SITLSLNSTR PPPSSSFSLP LDHDLDADAN LNPPTVEFSI  180
LPEKRASQDE DTCHRNKRMI KNRESAARSR ARKQAYTSEL EIKVARLMEE NAKLRRQQQE  240
KHCLQQAPAP FPKKQMLCRT LTAPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-22bZIP family protein