PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027089261.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB_related | ||||||||
Protein Properties | Length: 259aa MW: 28884.1 Da PI: 5.624 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.5 | 2.4e-16 | 36 | 80 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G W+ I +++g ++t+ q++s+ qk+ XP_027089261.1 36 REKWTEEEHQRFLEALKLYGRA-WRQIEEHVG-TKTAIQIRSHAQKF 80 789*****************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MRAHLETTAA QTQALTEMGN GYALKVRKPY TIKKQREKWT EEEHQRFLEA LKLYGRAWRQ 60 IEEHVGTKTA IQIRSHAQKF FAKVARDSNE CEGSLNPIEI PPPRPKKKPA HPYPRKVTDV 120 TKTTLDDPHQ PEQAPPFKRS GEERNSRSPT SVLSALGSDT SGSPSSEPQR SHLSPVSYTT 180 DDAHSAIVQL TENDNECMTS DSSVEEEKEY GHAILLATSA TQDDESAMEL DLLTFGRACP 240 AEDPAFEQAP AKLSCLEEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17300.1 | 4e-41 | MYB_related family protein |