PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027088866.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 749aa MW: 86318.2 Da PI: 7.879 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 88.7 | 8.2e-28 | 62 | 149 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e++ ++r+ ++++t+Cka+++vk++kdgkw+++++ +eHnHel p XP_027088866.1 62 SFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGITPESDGG---SSRRPSVKKTDCKASMHVKRKKDGKWYIHEFLKEHNHELLP 149 5****************************************999888...7788889*******************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 749 aa Download sequence |
MVDSSENAIQ VTAHMVDVAD QASHRDVGIA HSTAKDITGF GGVTEFEPHD GIEFESHEAA 60 YSFYQEYAKS MGFTTSIKNS RRSKKSKEFI DAKFACSRYG ITPESDGGSS RRPSVKKTDC 120 KASMHVKRKK DGKWYIHEFL KEHNHELLPA LAYHFRIHRN VKLAEKNNID ILHAVSERTR 180 KMYVQMSRQS GGSPEIGFLR SGSDSQLDRG RSLVVEEGDS QLMVEYFMHL QRENPYFFYA 240 IDVNEDQRLR NLFWVDAKSR KDYRSFNDVI VFDTSYMKGN EKMPFAPFVG VNHHFQPMLL 300 GCGLLADETV STFLWLMKTW HKAMGGQAPK VIITDQDKAL KVAVEEVLPN SRHCFALWHI 360 MERLPDTLSH TIKQHESFTR KFSKCVFKSL TDEQFDMKWW KMVGRFELHE NEWIHSLYED 420 RKKWVPAFLR DAFLAGMSTI QRSESLISFF DKYIHKKISL KEFIRQYGTI LQNRYEEEAI 480 ADFDTWHKQP ALKSPSPWEK QMSTIYTHAI FKKFQVEVLG VVGCHPKKES ENGSDVTFRV 540 DDCEKGEDFT VMWNEATSEV SCSCLMFEFK GFLCRHAMIV LQMCGLSSIP FRYILKRWTK 600 DVKNRQTVVD GTERILTRVQ RYNDLCRRAI ELGEEGSLSE ERYNIAFHAL VEGLKNCVDV 660 NNKTGTEYSS NPIVLRGAQE EKHGVLSTKE SKKKISNKKR KVQSDSEVAT LQVEGSLQPM 720 LGCNDHQWLL WKPAECAGTH TVELDGATS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G15090.1 | 0.0 | FAR1 family protein |