PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027086776.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Trihelix | ||||||||
Protein Properties | Length: 328aa MW: 36481.9 Da PI: 8.9091 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 47.5 | 4.7e-15 | 2 | 79 | 9 | 75 |
trihelix 9 aLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 +Liea+r ++er +++ ++ +W++v +++++ g+ rs++qC++kw+nl +++kk++e e++ + ++ XP_027086776.1 2 VLIEAKRMDDERRMKRQgdsvggekpggkPAELRWKWVEDYCWRNGCLRSQNQCNDKWDNLMRDFKKVREYERRLA-DH 79 7999999777776654334555555665599*****************************************9974.33 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MVLIEAKRMD DERRMKRQGD SVGGEKPGGK PAELRWKWVE DYCWRNGCLR SQNQCNDKWD 60 NLMRDFKKVR EYERRLADHQ KQLITIGESS SERERSDEKS YWKLEKNERK ANNLPSNLLP 120 QIYDALVEVV ERKVQRGSVV GLVGAGGTTA SIPNVPPSSA AALVGQPSSL PPSMQHLPIS 180 PPVSALPLPP PVVAQTPVQQ QQQHPHTHPF SQQLPTVDSD TSEHSDSPAK RRRRGEGTSG 240 GASGSESHEV GTAISRSASV IAETIQACEE REERRHRELL SLHERRLQIE ESKAEISRQG 300 INGLVDAVNK LANSILALAS HKTQSTPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35640.1 | 4e-48 | Trihelix family protein |