PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027086772.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Trihelix | ||||||||
Protein Properties | Length: 355aa MW: 39596.4 Da PI: 9.1553 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 58.5 | 1.7e-18 | 22 | 106 | 2 | 75 |
trihelix 2 WtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 Wt qe+++Liea+r ++er +++ ++ +W++v +++++ g+ rs++qC++kw+nl +++kk++e e++ + ++ XP_027086772.1 22 WTVQETMVLIEAKRMDDERRMKRQgdsvggekpggkPAELRWKWVEDYCWRNGCLRSQNQCNDKWDNLMRDFKKVREYERRLA-DH 106 **************777777664334555556666599*****************************************9974.33 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MHIVMANQGG NNVLRDYRKG NWTVQETMVL IEAKRMDDER RMKRQGDSVG GEKPGGKPAE 60 LRWKWVEDYC WRNGCLRSQN QCNDKWDNLM RDFKKVREYE RRLADHQKQL ITIGESSSER 120 ERSDEKSYWK LEKNERKANN LPSNLLPQIY DALVEVVERK VQRGSVVGLV GAGGTTASIP 180 NVPPSSAAAL VGQPSSLPPS MQHLPISPPV SALPLPPPVV AQTPVQQQQQ HPHTHPFSQQ 240 LPTVDSDTSE HSDSPAKRRR RGEGTSGGAS GSESHEVGTA ISRSASVIAE TIQACEEREE 300 RRHRELLSLH ERRLQIEESK AEISRQGING LVDAVNKLAN SILALASHKT QSTPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35640.1 | 7e-57 | Trihelix family protein |