PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027086754.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family Dof
Protein Properties Length: 308aa    MW: 33570 Da    PI: 7.5951
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027086754.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.71.7e-403697263
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    +e+alkcprCdstntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  XP_027086754.1 36 PEQALKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 97
                    6899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MDPSGAQHHH QDMSSQTLES MLVCTKAQQD KKPRPPEQAL KCPRCDSTNT KFCYYNNYSL  60
TQPRYFCKSC RRYWTKGGTL RNVPVGGGCR KNKRSSSSSS SSKRGQDQAV VATNTNPLSS  120
LTNLPYDSDI SLAIARLQKQ TNGHLGFDHD HELPMLGNPN NPHCEVLGNH NGHHHHVNSS  180
GSGAGGFFDA FRGGFLENPN GFHNLYYGMS NGNMGHVENG GGLGLNGSEE MSMVPYEDIG  240
GATTTATTVT TVKQEICNAR DGENRVLWGF PWQIGGEGNM GSDLDSGRQS WNNGFGSSWH  300
GLLNSPLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.18e-42Dof family protein