PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027086486.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 116aa    MW: 13755.7 Da    PI: 7.9674
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027086486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR159.31.2e-1826113189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     kfYn+YA ++ F+v+k++ +k  ++g +t+r++   keg +++ + + +  +rtra t+tgC  k+++ + +   k++v++l leHnHel
  XP_027086486.1  26 KFYNNYAFKTDFNVCKDYLNKD-KDGVTTSRRYSYCKEGVKRKYEGD-VMPKRTRAPTKTGCGTKMVIVLLReIMKYRVHDLILEHNHEL 113
                     6******************998.788899999988888888888888.8999**************99887779***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MDCNKLVEDR TPELEMEFNS EEDAHKFYNN YAFKTDFNVC KDYLNKDKDG VTTSRRYSYC  60
KEGVKRKYEG DVMPKRTRAP TKTGCGTKMV IVLLREIMKY RVHDLILEHN HELHIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.13e-11FAR1 family protein