PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027085838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 487aa MW: 53014.6 Da PI: 5.3794 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.6 | 8.2e-31 | 250 | 308 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ XP_027085838.1 250 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 308 699************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 487 aa Download sequence |
MCSRLLQKME NYQGDLADIL RASGGRSIAS SNISSAEVSV SAPRDWQFPS NQVGIYEEPS 60 LDEFGDPFTN MRDPLLLPDM DHMPASGFYD ASSTDHIITS GTTAAAENTG GFSCSDVGGG 120 GGGVGGCNNS SSLLTQRILD DHELSRRPPN NIFTRMLQIS PNAKPPSSPR ESQLLVAASP 180 RGLKPPTLVT NDMINTSNNS KVSVIENAPV QISSPRNTGI KRRKSQAKKV VCIPAPAPAN 240 SRPSGEIVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CSARKQVERS RTDPNMLVIT 300 YTSEHNHPWP TQRNALAGST RSQPTKSGST SKATNSSHAQ KATNLKEEEK PETQTDNASS 360 PIVTGSSSTG QVVKEETEME MEVEGLDKKK EMDNLDQFNE GFPQSYKPGL PDSNHSEDFF 420 ADLSELEADP LNLLFTQGYS GDEERENKNL ELFSFYDWTT NNSSMTTTTI MTTTTITSSL 480 EEAKKGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30650.1 | 9e-81 | WRKY family protein |