PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027085492.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 284aa    MW: 31060.6 Da    PI: 7.7025
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027085492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.6e-19145196256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g+
  XP_027085492.1 145 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAAIAYDRAAYRMRGA 196
                     8********.***********9987..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MTYGNGDLQA DLALLESIRQ HLLEESEAAA PALCFYNSRP VSYSGSNPSE ASFFPSFPDV  60
NPDGFPLYQN YDYDNMGPYA IVHDAVNNRR EPLLSTTTTM ATTMTTTAVS GAVKAEHEER  120
IEVSQMSNAA TAQPEARVVP PKGKHYRGVR RRPWGKFAAE IRDPAKNGAR VWLGTFETAE  180
DAAIAYDRAA YRMRGARALL NFPLRINSGE PEPVRITSKR SSVSPDHSSS SASENGTPKR  240
KKKAAAQVVE PPAVQRGWEE LYVGSNSNGE RIFATGTQFG STLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-44ERF family protein