PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027085393.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 354aa MW: 38608.8 Da PI: 6.6302

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027085393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	54.2	3.2e-17	175	228	3	56
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +lkr +r+ +NRe+ArrsR+RK+a ++ Le+ v++L +eN +L k+l +++ XP_027085393.1 175 DLKRIKRMVSNRESARRSRRRKQAHLADLEQQVEQLRGENGSLFKQLGDASQQF 228 69*****************************************97776655554 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MNKKAAQKPS PLRISASSEM KRSFSELALE EFFKHTRAAE DDQNPKDDQK VSAKAGTEAY 60 RCALGGDKCF ADTTSSNPTF PLIGNQEISN VLTRSDASMD NPHWSHNLAS RHSSLSATID 120 SQSSICVGSP TSATKSKGKD KRAMVATSGS SPEQSDDDEV ETEAGQCEES TDPMDLKRIK 180 RMVSNRESAR RSRRRKQAHL ADLEQQVEQL RGENGSLFKQ LGDASQQFKD ASTNNRVLKS 240 DVEALRAKVK LAEDMVTRGS LTSSLSHLLQ NYLSTPESLN NANMCRGENV STIVTVRGVD 300 PTYPDVGVSV QNSAARMGNV DNFNGDLKNG VTNDAMICMA DLWPWESHAG SVTK

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MNKKAAQKPS PLRISASSEM KRSFSELALE EFFKHTRAAE DDQNPKDDQK VSAKAGTEAY  60
RCALGGDKCF ADTTSSNPTF PLIGNQEISN VLTRSDASMD NPHWSHNLAS RHSSLSATID  120
SQSSICVGSP TSATKSKGKD KRAMVATSGS SPEQSDDDEV ETEAGQCEES TDPMDLKRIK  180
RMVSNRESAR RSRRRKQAHL ADLEQQVEQL RGENGSLFKQ LGDASQQFKD ASTNNRVLKS  240
DVEALRAKVK LAEDMVTRGS LTSSLSHLLQ NYLSTPESLN NANMCRGENV STIVTVRGVD  300
PTYPDVGVSV QNSAARMGNV DNFNGDLKNG VTNDAMICMA DLWPWESHAG SVTK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	197	RRSRRRKQ
2	192	197	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	4e-58	bZIP family protein