PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027085063.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 328aa MW: 36835.3 Da PI: 4.9364 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.1 | 7.4e-17 | 11 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l+++ +G +tWkt+++ g++R++k+c++rw +yl XP_027085063.1 11 KGAWSKEEDQILIHYMGNHGLETWKTVSEQAGLNRCGKSCRLRWTNYL 58 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.3 | 1.1e-15 | 64 | 107 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E ++ +++++G++ W++Ia++++ gRt++++k++w++ XP_027085063.1 64 RGEFSADEAATIISLHREHGNK-WSRIAAHLP-GRTDNDIKNFWNT 107 899*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MAASPENGVK KGAWSKEEDQ ILIHYMGNHG LETWKTVSEQ AGLNRCGKSC RLRWTNYLRP 60 GIKRGEFSAD EAATIISLHR EHGNKWSRIA AHLPGRTDND IKNFWNTRLK KKLLRRVINP 120 TIHKPIPDFN LLNFADQAQL LSVSDNPNLE AALANNANEL IKNQIQVLQN MLQIINPNPL 180 QYFQGNLDLY ELIQLNGVFD RTTTDLALNP LQAQSMIAGF RNESPVLLNQ QQPYTSNSLP 240 CFDGETIPCP VLDDNIIHSD NICNSEYSLP SVVSAAPESS TVKQMESFYV STEAPEQYSV 300 FDGWENLVDI DEASGSFWKD NFGFPADG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 3e-54 | MYB family protein |