PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027084838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bZIP | ||||||||
Protein Properties | Length: 402aa MW: 42360.5 Da PI: 7.8378 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 68 | 1.6e-21 | 298 | 360 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ e+++++ e+++l +++ XP_027084838.1 298 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRAEVNRIRSEYDQLLAQN 360 89*********************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 402 aa Download sequence |
MGSSEMDKSS KEAKEAKESK TPPQPSAPST GTPDWSGFQA YSPMPPHGFL ASSPQAHPYM 60 WGVQHLMPPY GTPPHPYVAM YPPGGIYAHP SIPPGSYPFS PFAMASPNGV AEASGNTPGN 120 TEVDGKPSEG KEKLPIKRSK GSLGSLNMIT GRNNEPGKTA GASANGAYSK SGESASDGSS 180 EGSDANSQNE SQMKSGQRQD SAETSQNGSA AHGSQNGGPN TPHSMVNSVP MVPISAPGAP 240 GGLSGPTTNL NIGMDYWGSA ASPTVPAMRG KVPTAPVAGG MVTGGRDGVQ SQLWIQDERE 300 LKRQRRKQSN RESARRSRLR KQAECDELAQ RADALKEENA SLRAEVNRIR SEYDQLLAQN 360 ASLKERLGEV PGPDDPRSSR NEQHAGNDAQ HSGQAEPLQR GQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 315 | 321 | RRSRLRK |
2 | 315 | 322 | RRSRLRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 1e-147 | bZIP family protein |