PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027084242.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 193aa    MW: 21713.2 Da    PI: 7.7106
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027084242.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.3e-19755254
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                    +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ + 
  XP_027084242.1  7 RYRGVRQRH-WGSWVSEIRHP-----IlkTRIWLGTFETAEDAARAYDEAARLMC 55
                    69******9.**********8.....556**********************8775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MARPQQRYRG VRQRHWGSWV SEIRHPILKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR  60
SNFPYNPNAP QTSSSKLLSA TLTAKLHKCY MASLQITKQH QQLHLRQQTT DHHKIHFTST  120
AAAVASGSPN CHNINIGGGN NNDHEKGVLS SGSGVVQQEA SADHQFVKQL EEDDHIEQMI  180
QELLDYESSL ELC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.12e-45ERF family protein