PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027084081.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ARR-B | ||||||||
Protein Properties | Length: 558aa MW: 61945 Da PI: 5.9524 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.1 | 4.1e-28 | 315 | 368 | 2 | 56 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +++WtpeLH++Fv+aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR++ XP_027084081.1 315 SKVDWTPELHKKFVQAVEQL-GIDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 368 6899****************.********************************96 PP | |||||||
2 | Myb_DNA-binding | 44.6 | 3.2e-14 | 317 | 366 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_027084081.1 317 VDWTPELHKKFVQAVEQLGIDqaIPSRILELMKvEGLTRHNVASHLQKYR 366 57***********************************************7 PP | |||||||
3 | Response_reg | 34.7 | 9.5e-13 | 24 | 129 | 2 | 109 |
EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS Response_reg 2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 l+++ + + +r le+ +y +v + + eal + +k +++ ++ ++ +++G+ +k +++++ +lp i++++++ +++ +++ +Ga XP_027084081.1 24 LLIESDACSAVEMRLKLEEMDY-IVSIFCNENEALSAISNKSecFHVAIVEVNTQNSSGI--FKFLETAN-DLPTIMISDNNCISTMMKCIALGA 114 666666666667778889****.***************999999*************995..78888877.9*********************** PP SEEEESS--HHHHHH CS Response_reg 95 kdflsKpfdpeelvk 109 +fl Kp++ ++l + XP_027084081.1 115 VEFLQKPVSDDKLQN 129 **********99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 558 aa Download sequence |
MPAMVCTADE LLGWKDFPKG LKVLLIESDA CSAVEMRLKL EEMDYIVSIF CNENEALSAI 60 SNKSECFHVA IVEVNTQNSS GIFKFLETAN DLPTIMISDN NCISTMMKCI ALGAVEFLQK 120 PVSDDKLQNI WQHVVHKQAF NAGGKDVSEA LKPVKESLIS MLQLPFGNAE TGKQASVEAE 180 QENNQDLLSG CDKYPAPSTP QLKQGERSLD DGDCQDQANF SMEQDSAEQD GECKSVETTC 240 GNSIFECTAL GSPASGEDAV KEEHESTNCC RTEINTTTCY EGKDRPSNKT SNAAGLNRSS 300 AVRNTCGIKA SKKRSKVDWT PELHKKFVQA VEQLGIDQAI PSRILELMKV EGLTRHNVAS 360 HLQKYRMHRR HILPKENERR WPHPGGSAQR NYYPHKPVMA FPPYHPNHTI PGGQVYPAWI 420 PPGTYTGGIH IWGSPYYPGW QVPNESWYWK PYSMTHADAW GCPVMPQTVG SYPQFAQQTA 480 PDFQTTIEMQ YTGSTLLNPS DLHAAEEVID QVVKEAISKP WLPLPLGLKP PSTECVLNEL 540 SRQGISKIPP HTKAPNIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-148 | ARR-B family protein |