PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027083422.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 266aa    MW: 30811.6 Da    PI: 6.6936
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027083422.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM144.65.4e-45161472128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                      pGfrF Pt++elv++yL++k+e+k++e+ +  i+ ++iy++ePw+Lpk     ++++ ++w+fF++r++++a+g r++r+t+sgyWkatg+  +
  XP_027083422.1  16 IPGFRFYPTEDELVSFYLHNKLEEKRVEELNRvIPVINIYESEPWQLPKlsgeLCSGDAEQWFFFVPRQEREARGGRPSRTTASGYWKATGSPSH 110
                     59************************7765544***************656654444777*********************************** PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     v+s++++++g+kk+Lvfykg+ap g+kt+W m+eyr+
  XP_027083422.1 111 VYSSDNRVIGVKKSLVFYKGKAPMGRKTKWKMNEYRA 147
                     ***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MDMQQEKQEG MSKETIPGFR FYPTEDELVS FYLHNKLEEK RVEELNRVIP VINIYESEPW  60
QLPKLSGELC SGDAEQWFFF VPRQEREARG GRPSRTTASG YWKATGSPSH VYSSDNRVIG  120
VKKSLVFYKG KAPMGRKTKW KMNEYRAIKE EWSTSSTHVI PKLRYEVSLC RVYIVSGSFR  180
AFDRRPVGAG TSREAVVPTI EDDDKDVRSQ TQRGATMDRK NSVEISASPE EVSVDRVDGE  240
GKHLEMDGEL RRMWEWDQFN DHMQLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-89NAC family protein