PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027083181.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 400aa MW: 45008.4 Da PI: 6.0738

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027083181.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.4	8.3e-51	29	155	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+Ptdeel+++yLkkkveg ++++ +vi+evdi+++ePwdLp k+v +++kew+fFs+r +ky++g++++rat+ gyWkatgk+++++s XP_027083181.1 29 MFPGFRFSPTDEELICFYLKKKVEGLDNSV-DVIPEVDICRFEPWDLPgKSVIQSDKEWFFFSPRGRKYPNGSQSKRATDLGYWKATGKERNIKS 122 579**********************999.99***********777778899********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g+k+tLvf++grapkg++t+W+mhey + XP_027083181.1 123 -GSTIIGTKRTLVFHTGRAPKGQRTEWIMHEYCM 155 .999**************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MGDQQENEIT SSSSTKKNME ISMAEASSMF PGFRFSPTDE ELICFYLKKK VEGLDNSVDV 60 IPEVDICRFE PWDLPGKSVI QSDKEWFFFS PRGRKYPNGS QSKRATDLGY WKATGKERNI 120 KSGSTIIGTK RTLVFHTGRA PKGQRTEWIM HEYCMSGKSQ DFMVVCRLRK NTEFHLDDSP 180 RRKPQEGRHP SAANNNAAAS SGIEQTDASE GALLGDCWSK ECSSSNNSHS TEQIESGFEC 240 DDKVPNELSP YASSSHQKDC DSIEEDYFAD IMKDDIIQLD DSAIYASPQH LQTVAPEPES 300 QNKSKQPAED TPSCSLPFQG TANRRLRLGR QKLEYNEAHP LNRYRVDKAN LPPKLVSHPD 360 LQQPPKLLVR LFSNVGSERL SIFFIALIIL AALFMYVQVG

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MGDQQENEIT SSSSTKKNME ISMAEASSMF PGFRFSPTDE ELICFYLKKK VEGLDNSVDV  60
IPEVDICRFE PWDLPGKSVI QSDKEWFFFS PRGRKYPNGS QSKRATDLGY WKATGKERNI  120
KSGSTIIGTK RTLVFHTGRA PKGQRTEWIM HEYCMSGKSQ DFMVVCRLRK NTEFHLDDSP  180
RRKPQEGRHP SAANNNAAAS SGIEQTDASE GALLGDCWSK ECSSSNNSHS TEQIESGFEC  240
DDKVPNELSP YASSSHQKDC DSIEEDYFAD IMKDDIIQLD DSAIYASPQH LQTVAPEPES  300
QNKSKQPAED TPSCSLPFQG TANRRLRLGR QKLEYNEAHP LNRYRVDKAN LPPKLVSHPD  360
LQQPPKLLVR LFSNVGSERL SIFFIALIIL AALFMYVQVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44290.1	1e-85	NAC family protein