PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027082811.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | B3 | ||||||||
Protein Properties | Length: 188aa MW: 20968.1 Da PI: 4.4563 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 37.8 | 3.5e-12 | 72 | 160 | 1 | 95 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+ +lt+s+v+ + +l lp + + + + + ++ + g+ W+ + + + + ++ WkeF+++n+Lk+gD + F+l++++ ++ ++k XP_027082811.1 72 FDIILTKSHVGPRFQLFLPTTIVPALP----SAMVPVVLTCCGKNWNTVY--YGDRTGKRFGPSWKEFASDNELKTGDCCFFELMESTMAQIKFK 160 67789999*****99****99997663....33455777889********..5555555599*********************997655545555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MSNQLVQPFL CAVKEEPFMT DSDTDEKPYV DLINSKSVPS GENSQLLSGS SSGMAEMDDI 60 EYWTISGKKP YFDIILTKSH VGPRFQLFLP TTIVPALPSA MVPVVLTCCG KNWNTVYYGD 120 RTGKRFGPSW KEFASDNELK TGDCCFFELM ESTMAQIKFK VIILRGDLPV LRFAEGDGET 180 PEKAIIIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58280.1 | 8e-08 | B3 family protein |