PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027082551.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 291aa MW: 33325.2 Da PI: 8.9658

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027082551.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52	1.3e-16	2	89	6	99
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +ps v+ +l pk+f+++h+ k ++ ++l de+ +++++k+ +k++ l++GW++F ++L+ gD+++F+l+++++f+++v++f++ XP_027082551.1 2 LPSQVSGGFWLQWPKDFCQKHMPK--KDEYIVLLDENEKEYDIKYLAQKSG----LSGGWRGFSIKHQLCKGDVLIFQLVDSNKFKFKVHIFKA 89 6888999999999******866..4558***********555555....9********************99*******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MLPSQVSGGF WLQWPKDFCQ KHMPKKDEYI VLLDENEKEY DIKYLAQKSG LSGGWRGFSI 60 KHQLCKGDVL IFQLVDSNKF KFKVHIFKAK GGSRKLERDN GLLNSEGKVT SEIAKDVKET 120 ESFNILWNGE VVDSEISEHV RSQYYQLCCS QKSGLHDGLV KCIDKKLAAG IISETVKIAD 180 AIRAAEITTT SCNDVQRWDQ TLKGFEGMGM NVAFLRATIK NILDSIQRKQ QEKIKRKTNE 240 RAQAEKEMRN LETQLVNVKK KIRVLDDEID VIRAQNEKLE HSFKETAIAP W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	3e-30	B3 family protein