PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027082278.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 172aa MW: 19675.1 Da PI: 8.2703 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 34.3 | 7.1e-11 | 53 | 117 | 54 | 127 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 + k+w+f++ + + y +gyW t + k+++ +g++ g kk L++ +g+++ g++t+W++h++r XP_027082278.1 53 TGKKWFFYTVEPNDYV-------FSGDGYWTPTSE-KAIYI-GGQVDGYKKELIYCRGTEHPGKRTNWCIHQFR 117 5678999998888875.......4679*****976.99999.99*****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MEKPSAASAR GNDDSGGKRT RIEVPVGCKF DPSDEELMFY LMNKILDSCE YSTGKKWFFY 60 TVEPNDYVFS GDGYWTPTSE KAIYIGGQVD GYKKELIYCR GTEHPGKRTN WCIHQFRQNP 120 DVYVANAIGN NVEYKKIYKK AGISTIYASR LYKPNLRGDF RGFDDYGFGF HG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 4e-12 | NAC family protein |