PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027081560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 641aa MW: 73294.6 Da PI: 6.7286 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 32.2 | 3.4e-10 | 4 | 46 | 50 | 91 |
FAR1 50 kerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 ++r +++++r+gC a+++vk +k +gk++vt++ +eHnHelap XP_027081560.1 4 RKRDPKPVSRIGCLAHFRVKYDKkSGKYVVTSFIKEHNHELAP 46 688999***************999****************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 641 aa Download sequence |
MWDRKRDPKP VSRIGCLAHF RVKYDKKSGK YVVTSFIKEH NHELAPPIVV PFLQPQKRAR 60 RVAVDVGFTK KDIEREWASS DIRDGDSRCV LTHSVLAYLS AKNDYDPGLF YKYDLDEENQ 120 LCSIFWADSK SRADYAFFGD VLVLNTKFRK NAYEKPFIIL AGLNNHDQTT VFGCALLGGK 180 TAETYVWLLE TFLEATNHKA PVSVITDGDK AIEEAIQKTF PTSQHRICRW HLFKDAVSSA 240 GDSSSFGPEF KKCMEENWNP EEFEVAWIKL VEKYGLQGHP WFEETYSRRT KWAEAYLREH 300 FFAGLTSIRG HGMNTYFTRF LQVWHKLHEF VRHYDKALVC LREDEAKADS ESESAYPAFC 360 TILRDLERHA ADVFTRSMFL KVREQIMGDA MLILSGKEYL KDDACWLYKF SEYMKPDAIW 420 KVRYDPSNQS LKCSCFKLVT DGVPCCHMVS VMKAEHLREF PRCCIHKRWT KCARSEIDSG 480 IDIQALNMAT QVARFRILNS TCSEMNYYAS QTIQGFNETR SLISKITSRV KHIYNSKGEV 540 DETAPEVSLD ADGSTTRSGM HDPKSTNSSG QCDATAVETP QPDDCSQRSH DQTTSQQLRL 600 NHGLQTSEGT GTTDDGEGRT QNGEFSGAPS QPINLIWEDN D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 8e-80 | FAR1 family protein |