PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027080675.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 376aa MW: 41621.9 Da PI: 6.033 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.3 | 1.1e-19 | 159 | 209 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+W+AeIrdps r r +lg+++taeeAa +++a+ +l+g XP_027080675.1 159 KKFRGVRQRP-WGKWAAEIRDPS----RrVRLWLGTYDTAEEAAMVYDHAAIQLRG 209 59********.**********84....34*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence |
MDQQRMQDML TNKKGVKYTE HRKQTTMVRP SPLPPSLAGR TRKSPDMNAV KPRVVRISVT 60 DADATDSSSD EDEEAFKRRH RVKRFINEVK IETFRDNGDG NVNACTSAGN VNSVWRSRGS 120 AAPAAAGNGT STTNKKRKKS SGGVGKGKQT RVAEGSNVKK FRGVRQRPWG KWAAEIRDPS 180 RRVRLWLGTY DTAEEAAMVY DHAAIQLRGP DALTNFATPP ARSVSSPPPE SATCSGYNSG 240 EESHNNQRSP KSVLRFASTS NSNEEAEAES CLPSPLHEEV VGIGKERRDS CGEEMCVSEN 300 FSHYSLIPED LRFEFEDPVV DFSDLFEDNS NIFEYARNFD NTFVDSSESV EFGSAMPDDF 360 FSDLGDIFGK DPLVAL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 135 | 139 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.1 | 7e-42 | ERF family protein |