PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027080467.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 389aa MW: 43871.9 Da PI: 4.4536

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027080467.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114	9.7e-36	49	140	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+++++ed++++++isws+ nsfvv+d+++f++++LpkyFkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F g+k+ll++ XP_027080467.1 49 FLTKTFDMVEDPSTDSVISWSKARNSFVVWDSHKFSTSLLPKYFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANECFLGGQKHLLKT 134 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+++ XP_027080467.1 135 IRRRRN 140 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MENVTIKIEE EEEGFVFPFS EGGSTGAAAG SSSSPRPMEG LHDMGPPPFL TKTFDMVEDP 60 STDSVISWSK ARNSFVVWDS HKFSTSLLPK YFKHSNFSSF VRQLNTYGFR KVDPDRWEFA 120 NECFLGGQKH LLKTIRRRRN VIPSITQQEG GGPCVELGHY DLEEEIERLK SDRNSLMAEV 180 FKLKQQQQTA RDHVMAMDER LKGTEKKQQQ TMSFLARAFS NPTFLQPYVD RHRQRQEQQR 240 IQIGHKRRLT MTPSVENLQE VASIAADADQ LLNDSGGEQE LVNMQREMET LLFTAALDDE 300 PSSIVNLNSP SIPTSAANVD PVAEHIWEEL LTGDLVTENE AEVVLLGDQP EADVEVEDLV 360 AETPEWGEGF SDLVDQMGYL IAKPDDTSK

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MENVTIKIEE EEEGFVFPFS EGGSTGAAAG SSSSPRPMEG LHDMGPPPFL TKTFDMVEDP  60
STDSVISWSK ARNSFVVWDS HKFSTSLLPK YFKHSNFSSF VRQLNTYGFR KVDPDRWEFA  120
NECFLGGQKH LLKTIRRRRN VIPSITQQEG GGPCVELGHY DLEEEIERLK SDRNSLMAEV  180
FKLKQQQQTA RDHVMAMDER LKGTEKKQQQ TMSFLARAFS NPTFLQPYVD RHRQRQEQQR  240
IQIGHKRRLT MTPSVENLQE VASIAADADQ LLNDSGGEQE LVNMQREMET LLFTAALDDE  300
PSSIVNLNSP SIPTSAANVD PVAEHIWEEL LTGDLVTENE AEVVLLGDQP EADVEVEDLV  360
AETPEWGEGF SDLVDQMGYL IAKPDDTSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-110	HSF family protein