PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027080309.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 579aa MW: 64692.7 Da PI: 5.7683

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027080309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.6e-09	498	536	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA+k gLt +qV++WF N R + XP_027080309.1 498 MFQNflHPYPKDAEKHLLAMKSGLTRSQVSNWFINARVR 536 5887779******************************88 PP
2	BELL	74.9	1.2e-24	372	439	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + ++kk +Ll lle Vd+rY+ + ++++tvis+F+av++l++ +++++Al++iS+ +++L+++i+++i XP_027080309.1 372 NAERKKKQLLGLLEAVDDRYNECLDEIHTVISAFHAVTELDP-PIHARFALQTISFLYKNLRERISNHI 439 5689************************************.9********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MPIDMTEPSS GNPFDANFLS SSELIVLNNR DRILSGIPGP SVVQGDGTSS QAWIHEPNSG 60 RISDSYMLRN TLPEREPMGV VPYGASHQIS STQVQDRYME GMPLSAASIA TLLAARSDNQ 120 ENLEKPVSSA PLIYPLEIPR SIVLNDNADN LNPSHSSMRY GYDGLPASTS TKWDFNNFAP 180 HPELAGAAVG RTGLQPFESM MNLYPNEWIT SENANLDSDS PSGCSRLSNE LSLSLAMTNP 240 SVVHRTSIQD QCSEICGSSS PCERCLGSEQ TSCNRNLSLG FGSYRPVQLS QFLSGSRYIH 300 VMQELLAEIA AYSLGSLDLM KSPAIGMEDR ADASISSSCT AVEGYLSAAS EDFSDASNIV 360 RYQIDPVLPG RNAERKKKQL LGLLEAVDDR YNECLDEIHT VISAFHAVTE LDPPIHARFA 420 LQTISFLYKN LRERISNHIL AMGAHLSQGV VRENEESFEA SFIQKQWALQ QLKRKDNQLW 480 RPQRGLPERS VSVLRAWMFQ NFLHPYPKDA EKHLLAMKSG LTRSQVSNWF INARVRLWKP 540 MIEEMYSEMN RRKIRHNDEE TNSNQRSRVS LENGRFSMY

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MPIDMTEPSS GNPFDANFLS SSELIVLNNR DRILSGIPGP SVVQGDGTSS QAWIHEPNSG  60
RISDSYMLRN TLPEREPMGV VPYGASHQIS STQVQDRYME GMPLSAASIA TLLAARSDNQ  120
ENLEKPVSSA PLIYPLEIPR SIVLNDNADN LNPSHSSMRY GYDGLPASTS TKWDFNNFAP  180
HPELAGAAVG RTGLQPFESM MNLYPNEWIT SENANLDSDS PSGCSRLSNE LSLSLAMTNP  240
SVVHRTSIQD QCSEICGSSS PCERCLGSEQ TSCNRNLSLG FGSYRPVQLS QFLSGSRYIH  300
VMQELLAEIA AYSLGSLDLM KSPAIGMEDR ADASISSSCT AVEGYLSAAS EDFSDASNIV  360
RYQIDPVLPG RNAERKKKQL LGLLEAVDDR YNECLDEIHT VISAFHAVTE LDPPIHARFA  420
LQTISFLYKN LRERISNHIL AMGAHLSQGV VRENEESFEA SFIQKQWALQ QLKRKDNQLW  480
RPQRGLPERS VSVLRAWMFQ NFLHPYPKDA EKHLLAMKSG LTRSQVSNWF INARVRLWKP  540
MIEEMYSEMN RRKIRHNDEE TNSNQRSRVS LENGRFSMY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-104	TALE family protein