PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027079862.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CPP

Protein Properties

Length: 855aa MW: 91915.8 Da PI: 6.1895

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027079862.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48	2.5e-15	445	483	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkk+kClk+YC+Cfaag +C+e C C++C+N+ e XP_027079862.1 445 CKRCNCKKTKCLKLYCDCFAAGIYCAEPCACQGCFNRPE 483 79**********************************876 PP
2	TCR	49.1	1.1e-15	529	567	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClkkYCeC++a++ Cs+ C+Ce C+N XP_027079862.1 529 RHKRGCNCKKSKCLKKYCECYQANVGCSDGCRCEACENV 567 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 855 aa Download sequence
MDSSPEQPSK PNNSTHSPPL PIPPLQVQES PVFSYISNLS PIKPDKAALG SQGFPGINSP 60 PLVFRSPHIN PNSQPSFLKR PQSAGSSDAG LSEEHESCKD TLTVAEESRV SSCHLSSRLR 120 SCPQKEFIDD SKPEKASSPP VCGNDYLTDI VNMDGGDSDS SANLTPKSSD DVSQSQHELL 180 DSKESAENTE DKDDTRREEM KMGAASVTLE QAEEYNLKDS PSDLKSVVPD QNSGDGNGPP 240 DLHPRVEPDK SVGHALENQS GGRSMAENAG SGHVIEVGCN LLSESLQVAQ DCGRSLENAG 300 VQCTESLENK VHRHCAQMGS GAKVSMRSAE RGSFNGLGKK SMSITGSSLH HNFSTSANVE 360 GVPISDESRH NEHASGAANS ASTLSPCSMK PLYEPVVLKP IELQPNSSNK RMCTSETSDS 420 FVDFGQSSPK KKRKKTLDAG DGSGCKRCNC KKTKCLKLYC DCFAAGIYCA EPCACQGCFN 480 RPEYEDTVLE TRQQIESRNP LAFAPKIIQH LTEPPTNEDG SHFTPSSARH KRGCNCKKSK 540 CLKKYCECYQ ANVGCSDGCR CEACENVYGQ KGEFGMIKDL ISKHGEKLDS SFGTTLESVA 600 SKDGLLHNEL YNPHSLTPLT PAFQCSDHGK GAPKAWLSSG GYLQSPESCL TYLAPYGMSP 660 GQAGNPDTHN MIIEANTGIM DLVSFGQGIG YGNEHTVNQS SPRCEVPRND GRLAALPDPQ 720 DWENTSRAQT YANHQVSSAN SLRWRRSSTH FDGTKPDEAV DFDGGLYSIL DDDTPEILKE 780 TPMPPNAIKV SSPNKKRVSP PHGQGTEPGS SSSTGLRTGR KFILQAVPSF PPLTPCIDSK 840 GATGMNNSQK SSSGK

Sequence ? help Back to Top

Protein Sequence Length: 855 aa Download sequence

MDSSPEQPSK PNNSTHSPPL PIPPLQVQES PVFSYISNLS PIKPDKAALG SQGFPGINSP  60
PLVFRSPHIN PNSQPSFLKR PQSAGSSDAG LSEEHESCKD TLTVAEESRV SSCHLSSRLR  120
SCPQKEFIDD SKPEKASSPP VCGNDYLTDI VNMDGGDSDS SANLTPKSSD DVSQSQHELL  180
DSKESAENTE DKDDTRREEM KMGAASVTLE QAEEYNLKDS PSDLKSVVPD QNSGDGNGPP  240
DLHPRVEPDK SVGHALENQS GGRSMAENAG SGHVIEVGCN LLSESLQVAQ DCGRSLENAG  300
VQCTESLENK VHRHCAQMGS GAKVSMRSAE RGSFNGLGKK SMSITGSSLH HNFSTSANVE  360
GVPISDESRH NEHASGAANS ASTLSPCSMK PLYEPVVLKP IELQPNSSNK RMCTSETSDS  420
FVDFGQSSPK KKRKKTLDAG DGSGCKRCNC KKTKCLKLYC DCFAAGIYCA EPCACQGCFN  480
RPEYEDTVLE TRQQIESRNP LAFAPKIIQH LTEPPTNEDG SHFTPSSARH KRGCNCKKSK  540
CLKKYCECYQ ANVGCSDGCR CEACENVYGQ KGEFGMIKDL ISKHGEKLDS SFGTTLESVA  600
SKDGLLHNEL YNPHSLTPLT PAFQCSDHGK GAPKAWLSSG GYLQSPESCL TYLAPYGMSP  660
GQAGNPDTHN MIIEANTGIM DLVSFGQGIG YGNEHTVNQS SPRCEVPRND GRLAALPDPQ  720
DWENTSRAQT YANHQVSSAN SLRWRRSSTH FDGTKPDEAV DFDGGLYSIL DDDTPEILKE  780
TPMPPNAIKV SSPNKKRVSP PHGQGTEPGS SSSTGLRTGR KFILQAVPSF PPLTPCIDSK  840
GATGMNNSQK SSSGK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	431	435	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	4e-64	CPP family protein