PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027079861.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CPP

Protein Properties

Length: 858aa MW: 92217.2 Da PI: 6.1892

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027079861.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48	2.5e-15	445	483	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkk+kClk+YC+Cfaag +C+e C C++C+N+ e XP_027079861.1 445 CKRCNCKKTKCLKLYCDCFAAGIYCAEPCACQGCFNRPE 483 79**********************************876 PP
2	TCR	49.1	1.1e-15	532	570	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClkkYCeC++a++ Cs+ C+Ce C+N XP_027079861.1 532 RHKRGCNCKKSKCLKKYCECYQANVGCSDGCRCEACENV 570 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 858 aa Download sequence
MDSSPEQPSK PNNSTHSPPL PIPPLQVQES PVFSYISNLS PIKPDKAALG SQGFPGINSP 60 PLVFRSPHIN PNSQPSFLKR PQSAGSSDAG LSEEHESCKD TLTVAEESRV SSCHLSSRLR 120 SCPQKEFIDD SKPEKASSPP VCGNDYLTDI VNMDGGDSDS SANLTPKSSD DVSQSQHELL 180 DSKESAENTE DKDDTRREEM KMGAASVTLE QAEEYNLKDS PSDLKSVVPD QNSGDGNGPP 240 DLHPRVEPDK SVGHALENQS GGRSMAENAG SGHVIEVGCN LLSESLQVAQ DCGRSLENAG 300 VQCTESLENK VHRHCAQMGS GAKVSMRSAE RGSFNGLGKK SMSITGSSLH HNFSTSANVE 360 GVPISDESRH NEHASGAANS ASTLSPCSMK PLYEPVVLKP IELQPNSSNK RMCTSETSDS 420 FVDFGQSSPK KKRKKTLDAG DGSGCKRCNC KKTKCLKLYC DCFAAGIYCA EPCACQGCFN 480 RPEYEDTVLE TRQQIESRNP LAFAPKIIQH LTEPPTNVCV EDGSHFTPSS ARHKRGCNCK 540 KSKCLKKYCE CYQANVGCSD GCRCEACENV YGQKGEFGMI KDLISKHGEK LDSSFGTTLE 600 SVASKDGLLH NELYNPHSLT PLTPAFQCSD HGKGAPKAWL SSGGYLQSPE SCLTYLAPYG 660 MSPGQAGNPD THNMIIEANT GIMDLVSFGQ GIGYGNEHTV NQSSPRCEVP RNDGRLAALP 720 DPQDWENTSR AQTYANHQVS SANSLRWRRS STHFDGTKPD EAVDFDGGLY SILDDDTPEI 780 LKETPMPPNA IKVSSPNKKR VSPPHGQGTE PGSSSSTGLR TGRKFILQAV PSFPPLTPCI 840 DSKGATGMNN SQKSSSGK

Sequence ? help Back to Top

Protein Sequence Length: 858 aa Download sequence

MDSSPEQPSK PNNSTHSPPL PIPPLQVQES PVFSYISNLS PIKPDKAALG SQGFPGINSP  60
PLVFRSPHIN PNSQPSFLKR PQSAGSSDAG LSEEHESCKD TLTVAEESRV SSCHLSSRLR  120
SCPQKEFIDD SKPEKASSPP VCGNDYLTDI VNMDGGDSDS SANLTPKSSD DVSQSQHELL  180
DSKESAENTE DKDDTRREEM KMGAASVTLE QAEEYNLKDS PSDLKSVVPD QNSGDGNGPP  240
DLHPRVEPDK SVGHALENQS GGRSMAENAG SGHVIEVGCN LLSESLQVAQ DCGRSLENAG  300
VQCTESLENK VHRHCAQMGS GAKVSMRSAE RGSFNGLGKK SMSITGSSLH HNFSTSANVE  360
GVPISDESRH NEHASGAANS ASTLSPCSMK PLYEPVVLKP IELQPNSSNK RMCTSETSDS  420
FVDFGQSSPK KKRKKTLDAG DGSGCKRCNC KKTKCLKLYC DCFAAGIYCA EPCACQGCFN  480
RPEYEDTVLE TRQQIESRNP LAFAPKIIQH LTEPPTNVCV EDGSHFTPSS ARHKRGCNCK  540
KSKCLKKYCE CYQANVGCSD GCRCEACENV YGQKGEFGMI KDLISKHGEK LDSSFGTTLE  600
SVASKDGLLH NELYNPHSLT PLTPAFQCSD HGKGAPKAWL SSGGYLQSPE SCLTYLAPYG  660
MSPGQAGNPD THNMIIEANT GIMDLVSFGQ GIGYGNEHTV NQSSPRCEVP RNDGRLAALP  720
DPQDWENTSR AQTYANHQVS SANSLRWRRS STHFDGTKPD EAVDFDGGLY SILDDDTPEI  780
LKETPMPPNA IKVSSPNKKR VSPPHGQGTE PGSSSSTGLR TGRKFILQAV PSFPPLTPCI  840
DSKGATGMNN SQKSSSGK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	431	435	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	4e-62	CPP family protein