PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027079852.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 327aa MW: 35395.6 Da PI: 8.2555

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027079852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	1e-39	72	133	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss XP_027079852.1 72 KEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSS 133 7899******************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MMVLKDSAKV PTCSSSPFKA FACFALFLCL MRKVETQEIM VEPMEEIVVP NGSTTSCSKP 60 GSSLERKVRP QKEQALNCPR CNSTNTKFCY YNNYSLSQPR YFCKTCRRYW TEGGSLRNIP 120 VGGGSRKNKR SSSSSSSSSV SSSKKLPDLI PPSSHQNPKI HEGQDLNLGF SSSHDFKTIT 180 ELIQVPNFDN NNKENLTSSS SNSTTTSCHL SALELLTGIT PIRGLSSFVP MPITTDPTVV 240 YSSSGGFQLP EFKPSLSFSL DGLGSSGGYG NLHGVQESSG GRPLFPFEDL KQVSGTTSTD 300 VDQQNRDQHA DSTGYWTGVL GGGGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.4	9e-45	Dof family protein