PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027079755.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 314aa    MW: 35339.5 Da    PI: 6.6804
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027079755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.86.2e-30156215159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ k+++ pr+YY+C++a +C+vkkkv+rs  dp++++ tYegeHnh+
  XP_027079755.1 156 VKDGYHWRKYGQKVTKDNPSPRAYYKCSFApSCQVKKKVQRSVGDPSILIATYEGEHNHQ 215
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MDTILEEDCL AFDLNMAPAR NTSDPLKPEF DDGHDLVLDE SKSTSGEEQP DILIDQLNQI  60
KSENKKLKEM LIDLRENYHI LQSHFIDLVQ KYSGDELPKS RKRMFEAENS FNTHSNDGYK  120
DSVLEEGGSP KRTREIRTNI SRVHVRVNLS DTSLAVKDGY HWRKYGQKVT KDNPSPRAYY  180
KCSFAPSCQV KKKVQRSVGD PSILIATYEG EHNHQRPLNA ETLVSSAHGA ASAAFSPGLK  240
RFEFSSRPKE TVDFTNHGLC AKFQRSVSEI GSNSIEQLMV EQIVSSLTRN PSFTTALATA  300
ISGRLLSRDS DQEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-61WRKY family protein