PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027079722.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 185aa    MW: 20890.1 Da    PI: 5.6738
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027079722.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.53.5e-111081594196
                     TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  41 esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     + g++We  +  +++ +r+    GWk+Fv +n+Lk gD + F+l++ s+++ v+kv
  XP_027079722.1 108 SCGKRWETFYHGDGSAKRF----GWKRFVMDNDLKKGDCCFFELMECSKTNIVFKV 159
                     4689**9999556666654....9*******************9977888888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MPGTSVQPLH GIVKEEPFSI LPYIDEKPCL DAMNTNFVSN RQRSKFQPGS SNGTAEVDDI  60
EYYTISGMKP YFDLILAKTH VNHPFRVNLP GRMVPELPFE LVPMVLISCG KRWETFYHGD  120
GSAKRFGWKR FVMDNDLKKG DCCFFELMEC SKTNIVFKVI ILRGSLPFGG GPEDGDTPET  180
AIFIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.15e-08B3 family protein