PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027078946.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 860aa MW: 92224 Da PI: 7.5942

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027078946.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3.1e-09	618	655	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + XP_027078946.1 618 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 655 664459******************************88 PP
2	BELL	122.2	2.1e-39	480	550	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e+q++k+kLls+l+eVd+rY++y+eq+q+v++sF+ v+g g+a pYt+lA+ka+SrhFrcLkdaia q+ XP_027078946.1 480 RLEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAIATQL 550 779*****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 860 aa Download sequence
MGIATQPPLL SFVTSQYSSK GGHHQQQLIL DKTNSLSSMS QDYHHQGIFS FSNGFERSQQ 60 EHQQQQHQQH IAQQIRRDKL RVQGFDPPPP LVTIDEVESS GLPGYETAGM LSEMFNFTSG 120 AATPGDISLE GQLSHNYRNS RPPPPPATPV GSEWYSNRQG GGMVVGGLGS LGESKNQNVV 180 GERDAITTTH HHHHHQHQQQ QQQQQISGIN ADSAAAMQLF LMNPQPRSPS PSQSHPPPAN 240 PTSSTLHMLL PNLPSISSPS TLHHQGFHHH HQVSAASPAG APFGLSSQFT WVPDGGTGGV 300 ATSATEIGGV VEGQGLSLSL SSSLQHLEAA KAEELRMEDG AAVLFFNQGG GGSNTSSAAQ 360 YAYKNLGGGH HHQPLHIAQG GGGVGQNHQL HVGFGSSLGV VNVLRNSKYA KAAQELLEEF 420 CSVGRGPLKK NKLARNNSTT NPNSNPSGNS GGGGVATNGG GGGNSSSSSK DLPPLSAADR 480 LEHQRRKVKL LSMLDEVDRR YNHYCEQMQM VVNSFDLVMG FGAAVPYTAL AQKAMSRHFR 540 CLKDAIATQL KHSCELLGEK DAGTSGVTKG ETPRLKLLEQ SLRQQRAFHQ MGMMEQEAWR 600 PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM 660 VEEMYQQEAK EEAEEREPSQ SNGSNIAQTP TPNATTSTTP SSTAATKTAT TATATETTAA 720 AAAAAAAITA TGKRSEINDS ENDPSFFAIN RQCFSENQAK NNCSSTTSTS KMSISTSLAT 780 QTATVRPPTM SSQSFPTAYD SEAACRRSGI VTSANAEMGS TFIRFGTSAG DVSLTLGLRH 840 AGNLPENSST PFSVRDFGGS

Sequence ? help Back to Top

Protein Sequence Length: 860 aa Download sequence

MGIATQPPLL SFVTSQYSSK GGHHQQQLIL DKTNSLSSMS QDYHHQGIFS FSNGFERSQQ  60
EHQQQQHQQH IAQQIRRDKL RVQGFDPPPP LVTIDEVESS GLPGYETAGM LSEMFNFTSG  120
AATPGDISLE GQLSHNYRNS RPPPPPATPV GSEWYSNRQG GGMVVGGLGS LGESKNQNVV  180
GERDAITTTH HHHHHQHQQQ QQQQQISGIN ADSAAAMQLF LMNPQPRSPS PSQSHPPPAN  240
PTSSTLHMLL PNLPSISSPS TLHHQGFHHH HQVSAASPAG APFGLSSQFT WVPDGGTGGV  300
ATSATEIGGV VEGQGLSLSL SSSLQHLEAA KAEELRMEDG AAVLFFNQGG GGSNTSSAAQ  360
YAYKNLGGGH HHQPLHIAQG GGGVGQNHQL HVGFGSSLGV VNVLRNSKYA KAAQELLEEF  420
CSVGRGPLKK NKLARNNSTT NPNSNPSGNS GGGGVATNGG GGGNSSSSSK DLPPLSAADR  480
LEHQRRKVKL LSMLDEVDRR YNHYCEQMQM VVNSFDLVMG FGAAVPYTAL AQKAMSRHFR  540
CLKDAIATQL KHSCELLGEK DAGTSGVTKG ETPRLKLLEQ SLRQQRAFHQ MGMMEQEAWR  600
PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM  660
VEEMYQQEAK EEAEEREPSQ SNGSNIAQTP TPNATTSTTP SSTAATKTAT TATATETTAA  720
AAAAAAAITA TGKRSEINDS ENDPSFFAIN RQCFSENQAK NNCSSTTSTS KMSISTSLAT  780
QTATVRPPTM SSQSFPTAYD SEAACRRSGI VTSANAEMGS TFIRFGTSAG DVSLTLGLRH  840
AGNLPENSST PFSVRDFGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-140	TALE family protein