PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027078451.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 650aa MW: 71874.5 Da PI: 4.8052

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027078451.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.8	1.3e-50	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd elv++yLk+kv gkk+++ e+i+e++iyk+ PwdLp k ++k+++ ewyfF++r++kya+g+r nr+t++gyWk+tgkd++v+ XP_027078451.1 6 LPPGFRFHPTDVELVMYYLKRKVMGKKIPF-EAISELNIYKFSPWDLPdKsCLKSKDLEWYFFCPRERKYASGSRMNRSTETGYWKTTGKDRPVT 99 79**************************.89**********96347788888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ vg+ ktLvf++g ap+g++tdWv+heyr+ XP_027078451.1 100 Y-NKNSVGMVKTLVFHQGCAPRGQRTDWVIHEYRI 133 .9999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MVRTSLPPGF RFHPTDVELV MYYLKRKVMG KKIPFEAISE LNIYKFSPWD LPDKSCLKSK 60 DLEWYFFCPR ERKYASGSRM NRSTETGYWK TTGKDRPVTY NKNSVGMVKT LVFHQGCAPR 120 GQRTDWVIHE YRIEDKNLAD MGYAQDAYVL CKLFHKSGPG PKNGASYGAP FREEDWDDDE 180 EIPVDSLLPG GPSTVEPVQP ENDNSSAAIS LVDLGNAPLM PPNEPGPSFV QPSKDTVLSN 240 GQNSSMVTRV VDTGNASGWS LSEAGLTSAS HSGNGMDMDP PDDILHLLAA FSEDSPLLPT 300 VNGNTELGDL GQGRAAEAIP HSDGGDLFSG LEDLSNLAEL NGGGLNLFDN YQIGYTTNNM 360 RLQDDSGFLE LNDLDAPLNF TAQSCGPEQM HTGGLYRPSN SSGSEHVFAG SLCTEYNTSN 420 HTWNGDNIPG YEQHPTDLHH LLVLPDASDI QGNSTSIFPM GNVYDSTNAA YNLDFTTNRP 480 LEDIRNAAGN QERGAQQRTP HYSRLQQLLE SVPADPASAA YDGSSIHVKA EVTYRFATCT 540 KDALSVMVGE STFVFSPWWN LPVLGFQKAV GYRGCGSPVV FCLRLDSAFV CMLMFSLLRE 600 FVWYLWSWFC FCEIIGCFKT IHQFVLTHQR AHVVSIKSMD FINFVSVLCS

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MVRTSLPPGF RFHPTDVELV MYYLKRKVMG KKIPFEAISE LNIYKFSPWD LPDKSCLKSK  60
DLEWYFFCPR ERKYASGSRM NRSTETGYWK TTGKDRPVTY NKNSVGMVKT LVFHQGCAPR  120
GQRTDWVIHE YRIEDKNLAD MGYAQDAYVL CKLFHKSGPG PKNGASYGAP FREEDWDDDE  180
EIPVDSLLPG GPSTVEPVQP ENDNSSAAIS LVDLGNAPLM PPNEPGPSFV QPSKDTVLSN  240
GQNSSMVTRV VDTGNASGWS LSEAGLTSAS HSGNGMDMDP PDDILHLLAA FSEDSPLLPT  300
VNGNTELGDL GQGRAAEAIP HSDGGDLFSG LEDLSNLAEL NGGGLNLFDN YQIGYTTNNM  360
RLQDDSGFLE LNDLDAPLNF TAQSCGPEQM HTGGLYRPSN SSGSEHVFAG SLCTEYNTSN  420
HTWNGDNIPG YEQHPTDLHH LLVLPDASDI QGNSTSIFPM GNVYDSTNAA YNLDFTTNRP  480
LEDIRNAAGN QERGAQQRTP HYSRLQQLLE SVPADPASAA YDGSSIHVKA EVTYRFATCT  540
KDALSVMVGE STFVFSPWWN LPVLGFQKAV GYRGCGSPVV FCLRLDSAFV CMLMFSLLRE  600
FVWYLWSWFC FCEIIGCFKT IHQFVLTHQR AHVVSIKSMD FINFVSVLCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	1e-87	NAC family protein