PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027078366.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 324aa    MW: 36579.8 Da    PI: 5.4035
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027078366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.74.4e-21131181256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  XP_027078366.1 131 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 181
                     59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MATAIDIYSY SNPVFSLSSD PLREELMKAL EPFMKAHMFS QGLSSFDEMG FDEQSGGGSI  60
GLNHLTPYQI LEVEAQIKLQ NQQQQYLAAQ SLQNYSSTRQ LQHQNHSHLS FLGPKPVHMK  120
QVGTPPKPAK LYRGVRQRHW GKWVAEIRLP KNRTRLWLGT FDTAEEAALA YDKAAYKLRG  180
EFARLNFPNL RHQLSQDFGD FKPLHSSVDA KLEAICQSLA DSQKQGNTGE QQQKKVGVQT  240
IPKVENTFDD SLNSEYFYPG NEGVKVEETS SSLSPSRSDE TSSLEMSSPE SDITFLDFAE  300
PTFDQSENFL LQKYPSVEID WAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.14e-61ERF family protein