PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027078154.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 286aa MW: 32898.4 Da PI: 8.9096

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027078154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	152.5	2e-47	12	138	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yLk+ ++g+k++ +vi ++iy+++Pw+Lp ++k +e+ewyfF++rd+++ +g r+nr+tk+g+Wkatg+d+++ s XP_027078154.1 12 PGFRFHPTEEELLSFYLKRTASGRKIRS-DVIGFLNIYQHDPWELPGMAKIGEREWYFFVHRDRRHGHGGRPNRTTKDGFWKATGSDRQIRSLsd 105 9************************9.99***********888999**********************************98766 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ glkktLvfykgrap+g++tdW+m+eyrl XP_027078154.1 106 PKKVLGLKKTLVFYKGRAPRGSRTDWIMNEYRL 138 7788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MDNNSLGELP LPGFRFHPTE EELLSFYLKR TASGRKIRSD VIGFLNIYQH DPWELPGMAK 60 IGEREWYFFV HRDRRHGHGG RPNRTTKDGF WKATGSDRQI RSLSDPKKVL GLKKTLVFYK 120 GRAPRGSRTD WIMNEYRLPD NHHHLPKEDV VLCKIYRKAT SLKILEHRAA MEDIISKTVD 180 PTLSSAQSQE GKIPEKNLGE SFSQKQSTIN LPMTKQEDDD LSVPNSSAKF GCLNYNCDLK 240 ELQVLDVPKF SMDATTDAFW TQMRSPWLDN WSPSVYANLL NCSPHC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	2e-84	NAC family protein