PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027077885.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 343aa MW: 39203.7 Da PI: 4.8425

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027077885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.4	3.9e-55	9	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL+ k ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_027077885.1 9 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQdKcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATIAGFWKATGRDKSV 102 69**************************.9***********943432233667******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k++l+g++ktLvfykgrap+g+k+dW+mheyrle XP_027077885.1 103 YD-KSKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 138 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MMDTAESCVP PGFRFHPTDE ELVGYYLRKK VASQKIDLDV IRDIDLYRIE PWDLQDKCRI 60 GYEEQNEWYF FSHKDKKYPT GTRTNRATIA GFWKATGRDK SVYDKSKLIG MRKTLVFYKG 120 RAPNGQKSDW IMHEYRLESE ENGPPQEEGW VVCRAFKKRT TSGQTKSIEA WDSSYFYDEP 180 SGVSSVVDPL DYITRQPANN YLSQNFICKQ EIEAENLNNF LNTTDPFVQL PQLESPSMPQ 240 LKKPSSISLV SENTEDDEQP LRGCSSSKKV TDWRALDKFV ASQLSHDQER YEGDIVSAGF 300 EGHESSDLGL LLLQSGREEG SSKLNGFFSS SSDCDIGICV FDK

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MMDTAESCVP PGFRFHPTDE ELVGYYLRKK VASQKIDLDV IRDIDLYRIE PWDLQDKCRI  60
GYEEQNEWYF FSHKDKKYPT GTRTNRATIA GFWKATGRDK SVYDKSKLIG MRKTLVFYKG  120
RAPNGQKSDW IMHEYRLESE ENGPPQEEGW VVCRAFKKRT TSGQTKSIEA WDSSYFYDEP  180
SGVSSVVDPL DYITRQPANN YLSQNFICKQ EIEAENLNNF LNTTDPFVQL PQLESPSMPQ  240
LKKPSSISLV SENTEDDEQP LRGCSSSKKV TDWRALDKFV ASQLSHDQER YEGDIVSAGF  300
EGHESSDLGL LLLQSGREEG SSKLNGFFSS SSDCDIGICV FDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-148	NAC family protein