PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027077880.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 828aa MW: 94677 Da PI: 6.4455

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027077880.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	97.5	1.5e-30	128	220	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s s+ks+r+g i++r fvC keg+r e++k+ +++r+raetr+gCka+l+vk +++g w+v+++++ HnHel+p XP_027077880.1 128 FYNSYARRIGFSTRVSMSRKSRRDGAIIQRSFVCAKEGFRIEKEKSgcnGGRAKRPRAETRVGCKAMLVVKIQDSGSWVVSSFVKGHNHELVP 220 9***************************************999999889999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 828 aa Download sequence
MYAALFEEYE NYLFDLCTCR IIICYEKTMD FEPLTVGNDV TEFDMLGLGI GIGLGEETID 60 IAHPMDEDED EDEDKDRNFV NPFHSSSDGV NFSGNGGNSG EICVLGGDTN LEPYEGMEFE 120 SEEAAKAFYN SYARRIGFST RVSMSRKSRR DGAIIQRSFV CAKEGFRIEK EKSGCNGGRA 180 KRPRAETRVG CKAMLVVKIQ DSGSWVVSSF VKGHNHELVP PDKVHCLRSH RHVSGAAKSL 240 IDTLQGAGIG PSGIMSALIK EYGGISNVGF TERDCRNYMR SSKQRTLGGD TQVLLDYFKL 300 KHLENPAFFY AVQGDEDQCM SNIFWADPKA LCNYTYFGDT VTFDSTYRSN RYRLPFAPFT 360 GVNHHGQPVL FGCALLINES EASFVWLFKT WLAAMSGKLP ISITTHHDRV IRSAVTQVFP 420 EVRHRFCKWH IFKECQEKLS PMLSEHPTFE AELHKCVNFT DSIEEFESCW CNLIDGYALR 480 ENEWLQNVYA DRKQWVPVYL RDTFFAELSI TQRSDSMNSY FDGYVNASTT VQLFIKQYEK 540 ALESRHEKEV KADYDTMNAA PILKTPSPME KQAADIYTRK LFIKFQEELV ETLTFLATKI 600 EDQEEATTYQ VAKFGESHKV HFVRYSVRET KATCSCQMFE FSGLLCRHIL TFFRVANVLT 660 LPPLYVLRRW TKSARSSLML EDATNDLSNG SRESLTARYN KLRHEVFKYV DEGMQTEETY 720 NAAMDALREA ANKVSMARKT ARTSSDSNRT RKQDHSTLEH DESNIDGVHP LDSDEQDKKI 780 QKLTRQLKRA QRKCEAYRAN LFSVLKDIEQ QKLQLSVKVQ NIKLDMKD

Sequence ? help Back to Top

Protein Sequence Length: 828 aa Download sequence

MYAALFEEYE NYLFDLCTCR IIICYEKTMD FEPLTVGNDV TEFDMLGLGI GIGLGEETID  60
IAHPMDEDED EDEDKDRNFV NPFHSSSDGV NFSGNGGNSG EICVLGGDTN LEPYEGMEFE  120
SEEAAKAFYN SYARRIGFST RVSMSRKSRR DGAIIQRSFV CAKEGFRIEK EKSGCNGGRA  180
KRPRAETRVG CKAMLVVKIQ DSGSWVVSSF VKGHNHELVP PDKVHCLRSH RHVSGAAKSL  240
IDTLQGAGIG PSGIMSALIK EYGGISNVGF TERDCRNYMR SSKQRTLGGD TQVLLDYFKL  300
KHLENPAFFY AVQGDEDQCM SNIFWADPKA LCNYTYFGDT VTFDSTYRSN RYRLPFAPFT  360
GVNHHGQPVL FGCALLINES EASFVWLFKT WLAAMSGKLP ISITTHHDRV IRSAVTQVFP  420
EVRHRFCKWH IFKECQEKLS PMLSEHPTFE AELHKCVNFT DSIEEFESCW CNLIDGYALR  480
ENEWLQNVYA DRKQWVPVYL RDTFFAELSI TQRSDSMNSY FDGYVNASTT VQLFIKQYEK  540
ALESRHEKEV KADYDTMNAA PILKTPSPME KQAADIYTRK LFIKFQEELV ETLTFLATKI  600
EDQEEATTYQ VAKFGESHKV HFVRYSVRET KATCSCQMFE FSGLLCRHIL TFFRVANVLT  660
LPPLYVLRRW TKSARSSLML EDATNDLSNG SRESLTARYN KLRHEVFKYV DEGMQTEETY  720
NAAMDALREA ANKVSMARKT ARTSSDSNRT RKQDHSTLEH DESNIDGVHP LDSDEQDKKI  780
QKLTRQLKRA QRKCEAYRAN LFSVLKDIEQ QKLQLSVKVQ NIKLDMKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein