PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027077832.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 662aa MW: 75388.7 Da PI: 5.6294 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 181.2 | 2.6e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k+el e+i+evd+yk+ePw+Lp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_027077832.1 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EIIPEVDLYKCEPWELPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79****************************.99***************6434555777************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + ++vg+kktLv+y+grap+g +tdWvmheyrl XP_027077832.1 100 S-QARAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 *.9999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 662 aa Download sequence |
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWE LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QARAVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDERECET NSGLQDAYAL CRVFKKSLNI PKIGDHYGTA TASDRSSSID 180 PYSEGRCDDL ESFDYSMPSA TTINNFNYPM QSASCSSNII HGSPLNNINE GPSDSRWMQY 240 LSDEAFGFSN PSFPNHAAMS YPPSRVDIAL ECARLQHRFP LSPLEVQDFP QVGFADARMP 300 QLGYIHENPN QQDIVEEILS VAQASQDFMN EDAWGGNYAP ADDFSFLPPT NQIHDSSSFK 360 FIDKLREDCS FRSIDIGMDE GLKSERMVEN LRWVGMSDKD LEKSFLEEFK TVPIESISTF 420 QREENQVPGE TVHQNDQNEA EKTDYSLGFN NDKGSDNFLT DGDVEDFSST SNFEVYEKIE 480 VSHGMLISTR QTANTFYHQL MPSKTVRVHL HPMIMHDFPV AKSDSRTVPK TGHFPAKFSS 540 FSSAISKSLK PWRKTVRTFI SMIAILNAYW IFYGEYLEDK EPMDDPVMLS NKASELIEGD 600 CTSKTMIKTI KVQDYELNCE KSRVSMVGKG GSISAVHNKI WTYLTLTLAL CTFWMHQIVP 660 SP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 1e-155 | NAC family protein |