PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027077802.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 228aa MW: 26099.3 Da PI: 9.1631

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027077802.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.7	2.1e-32	151	209	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ XP_027077802.1 151 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHIHS 209 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MREILNSASQ TMLNQSLFED QDMSSQLGFF AFSSNPYNLP FGCSQPSLKT LTAVAGSLAA 60 DTQTTLSESA TQKQKEDVTS HFGEPPQLRS LQRSNANLWA WGEVNDCMNS KKNGGDNYLG 120 VATIKMKKIK ARRKVREPRF CFKTLSEVDV LDDGYKWRKY GQKVVKNTQH PRSYYRCTQD 180 NCRVKKRVER LAEDPRMVIT TYEGRHIHSP SQDEDDSQAS SQMNNFFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	5e-58	WRKY family protein