PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027077771.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Trihelix | ||||||||
Protein Properties | Length: 513aa MW: 57332.6 Da PI: 5.3786 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 66.7 | 4.9e-21 | 142 | 238 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdq 84 +Wt++ v++Li+++ +++e+ ++ kk++W+ vsk+++++g+ +sp+qC++k+++lnkrykk++++ +++ +++++++ +++++ XP_027077771.1 142 KWTDNIVRLLIQVVANVGEDGPSEGaegarrksgiIKKGKWRTVSKVLMSKGLCVSPQQCEDKFNDLNKRYKKLNDILGRGtSCRVVENPALLNN 236 7**************988888754335556677779*********************************************669**********9 PP trihelix 85 le 86 +e XP_027077771.1 237 ME 238 98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 513 aa Download sequence |
MNNNNPGSGF LSGYTGGFLG MNRNQQNPGG LLGMSRSHQQ NLSSSNPARL QNDQVPSPMN 60 MISVAEKDSR IGLREVKDSA PRGFAMTFAR ERVAGPRNVM SNGAVNINEI SSDEDDPSMA 120 EGNGRDTGGG KGKKDAPWVR MKWTDNIVRL LIQVVANVGE DGPSEGAEGA RRKSGIIKKG 180 KWRTVSKVLM SKGLCVSPQQ CEDKFNDLNK RYKKLNDILG RGTSCRVVEN PALLNNMEHL 240 SDKAKEDVRK LLGSKHLFYK EMCAYHNGQK ITDCNDFELP VHAASVAEQI WEHCDGSPVV 300 GEGTKDKDGS PVAGEGTTDK DGSPVAAQSS KDNDISEGDD ADENDESDHY MSEDEAADNN 360 NSGSVDRVET SENREVWKDY GNTRSRSGAG DDFQAEIAEM FSDPTKSQWE RREWIRKRML 420 QLHEERIGIQ AEAFELEKQR LKWQRFCNKK ELELETARLE KERLIIENER KALQLKQKEV 480 EVEFRRPEST FNLTSFSIDI MGGREQIDSG RQH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 3e-58 | Trihelix family protein |