PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027077609.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

DBB

Protein Properties

Length: 185aa MW: 20454.2 Da PI: 6.291

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027077609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.1	1.5e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC++C ++ H XP_027077609.1 4 LCDVCESAAAILFCAADEAALCRSCDDKVH 33 7*************************9998 PP
2	zf-B_box	27.4	6.7e-09	52	86	2	36
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg 36 + + C+ +e+ ++ ++Ce +++ lC +C + H g XP_027077609.1 52 DVPQCDICENAPAFFYCEVDGSSLCLQCDMIVHVG 86 5689**************************99955 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MRTLCDVCES AAAILFCAAD EAALCRSCDD KVHMCNKLAS RHVRVGLANP SDVPQCDICE 60 NAPAFFYCEV DGSSLCLQCD MIVHVGGKRT HARYLLLRQR VEFPGDKPAR LEEPATQTLD 120 QGENMREYGP SYKLVVGDKH QNHKVPSIPI SDGSTDGHAQ VETQMIDLNM KPNRLHGQAS 180 KNQEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	1e-75	DBB family protein