PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027076835.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 215aa    MW: 24130.2 Da    PI: 8.4635
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027076835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.76.6e-06179206330
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
             HLH   3 rahnerErrRRdriNsafeeLrellPka 30 
                     + h  +Er+RR+++ + ++ L  ++P +
  XP_027076835.1 179 QDHILAERKRRQKLSKHIAALSAVVPDL 206
                     67999*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MARSEINHMD LSTEKWLSEI LEMDVPALCY QWPMMNSIDQ SVNEDILFNR FSSSDHESYP  60
IHPSSSIKNK QLHEASQTSG VSLSQPIQLI NNDKDSRLIC TSRKPPSSPS PRIISFGAGT  120
CNYPKHTVKT KSDKMMHLGT AYYSYISPNS FNQEPSEALE YGVSSPFEKG FSGTPVRAQD  180
HILAERKRRQ KLSKHIAALS AVVPDLKKVS EIRSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185190ERKRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-09bHLH family protein